yes, we saw this and tried to replicate it on our end, with no success.
It syncs and plays the correct scale here. But it seems you are using the “Keys Lock - Chord Extensions” mode which depends on the last chord played which makes it a bit hard to diagnose as this info is not synced.
Would you mind sharing the project file or the midi sequences you have used?
Thanks for taking a look. I created a simple Ableton Live project, which reproduces the issue. You can download from the link below.
To reproduce, simply open the Scaler on the first track. Change its Scale. Sync the session. Hit play. Notice the notes are off. While it is playing, open the second Scaler instance. You will observe the scale takes effect, and the notes sound right.
I am on Windows 10.
Hopefully you have access to Ableton Live. If not, I will think of something else.